HTLV1 Target gene Detail Information

> WASHC5 Gene Search Result


Gene Information
Gene Name WASHC5
Gene ID 9897
Gene Full Name WASH complex subunit 5
Gene Alias KIAA0196|RTSC|RTSC1|SPG8
Transcripts ENSG00000164961
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytokinetic bridge, Mitotic spindle, Cytosol;Primary cilium, Centrosome, Basal body;
Membrane Info Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q12768
HGNC ID HGNC:28984
OMIM ID 610657
Summary This gene encodes a 134 kDa protein named strumpellin that is predicted to have multiple transmembrane domains and a spectrin-repeat-containing domain. This ubiquitously expressed gene has its highest expression in skeletal muscle. The protein is named for Strumpell disease; a form of hereditary spastic paraplegia (HSP). Spastic paraplegias are a diverse group of disorders in which the autosomal dominant forms are characterized by progressive, lower extremity spasticity caused by axonal degeneration in the terminal portions of the longest descending and ascending corticospinal tracts. More than 30 loci (SPG1-33) have been implicated in hereditary spastic paraplegia diseases. [provided by RefSeq, Aug 2009]
Target gene [WASHC5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007506 chr8 54 1 0 55 View
6018061 chr8 7 0 2 9 View

Target gene [WASHC5] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - WASHC5 peak across samples

Peak Plot