HBV Target gene Detail Information

> ABCB5 Gene Search Result


Gene Information
Gene Name ABCB5
Gene ID 340273
Gene Full Name ATP binding cassette subfamily B member 5
Gene Alias ABCB5alpha|ABCB5beta|EST422562
Transcripts ENSG00000004846
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q2M3G0
HGNC ID HGNC:46
OMIM ID 611785
Summary ABCB5 belongs to the ATP-binding cassette (ABC) transporter superfamily of integral membrane proteins. These proteins participate in ATP-dependent transmembrane transport of structurally diverse molecules ranging from small ions, sugars, and peptides to more complex organic molecules (Chen et al., 2005 [PubMed 15760339]).[supplied by OMIM, Mar 2008]
Target gene [ABCB5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012300 chr7 4 2 1 7 View

Target gene [ABCB5] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE64877 		Chip-seq 2 Illumina Genome Analyzer (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ABCB5 peak across samples

Peak Plot

> Dataset: GSE68402 - ABCB5 peak across samples

Peak Plot

> Dataset: GSE270130 - ABCB5 peak across samples

Peak Plot

> Dataset: GSE64877 - ABCB5 peak across samples

Peak Plot

> Dataset: GSE131257 - ABCB5 peak across samples

Peak Plot