HTLV1 Target gene Detail Information

> ABCB5 Gene Search Result


Gene Information
Gene Name ABCB5
Gene ID 340273
Gene Full Name ATP binding cassette subfamily B member 5
Gene Alias ABCB5alpha|ABCB5beta|EST422562
Transcripts ENSG00000004846
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q2M3G0
HGNC ID HGNC:46
OMIM ID 611785
Summary ABCB5 belongs to the ATP-binding cassette (ABC) transporter superfamily of integral membrane proteins. These proteins participate in ATP-dependent transmembrane transport of structurally diverse molecules ranging from small ions, sugars, and peptides to more complex organic molecules (Chen et al., 2005 [PubMed 15760339]).[supplied by OMIM, Mar 2008]
Target gene [ABCB5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6026734 chr7 2 0 0 2 View

Target gene [ABCB5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ABCB5 peak across samples

Peak Plot