HTLV1 Target gene Detail Information

> ABTB1 Gene Search Result


Gene Information
Gene Name ABTB1
Gene ID 80325
Gene Full Name ankyrin repeat and BTB domain containing 1
Gene Alias BPOZ|BPOZ-2|BTB3|BTBD21|EF1ABP|PP2259
Transcripts ENSG00000114626
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID Q969K4
HGNC ID HGNC:18275
OMIM ID 608308
Summary This gene encodes a protein with an ankyrin repeat region and two BTB/POZ domains, which are thought to be involved in protein-protein interactions. Expression of this gene is activated by the phosphatase and tensin homolog, a tumor suppressor. Alternate splicing results in three transcript variants. [provided by RefSeq, Mar 2010]
Target gene [ABTB1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006903 chr3 32 23 7 62 View

Target gene [ABTB1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ABTB1 peak across samples

Peak Plot