HTLV1 Target gene Detail Information

> AGO3 Gene Search Result


Gene Information
Gene Name AGO3
Gene ID 192669
Gene Full Name argonaute RISC catalytic component 3
Gene Alias EIF2C3
Transcripts ENSG00000126070
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytoplasmic bodies;Nucleoplasm, Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9H9G7
HGNC ID HGNC:18421
OMIM ID 607355
Summary This gene encodes a member of the Argonaute family of proteins which play a role in RNA interference. The encoded protein is highly basic, contains a PAZ domain and a PIWI domain, and may play a role in short-interfering-RNA-mediated gene silencing. This gene is located on chromosome 1 in a tandem cluster of closely related family members including argonaute 4 and eukaryotic translation initiation factor 2C, 1. Two transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Target gene [AGO3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008276 chr1 29 4 14 47 View
6016772 chr1 11 1 0 12 View

Target gene [AGO3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - AGO3 peak across samples

Peak Plot