HTLV1 Target gene Detail Information

> ANKS1B Gene Search Result


Gene Information
Gene Name ANKS1B
Gene ID 56899
Gene Full Name ankyrin repeat and sterile alpha motif domain containing 1B
Gene Alias AIDA|AIDA-1|ANKS2|EB-1|EB1|cajalin-2
Transcripts ENSG00000185046
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Plasma membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q7Z6G8
HGNC ID HGNC:24600
OMIM ID 607815
Summary This gene encodes a multi-domain protein that is predominantly expressed in brain and testis. This protein interacts with amyloid beta protein precursor (AbetaPP) and may have a role in normal brain development, and in the pathogenesis of Alzheimer's disease. Expression of this gene has been shown to be elevated in patients with pre-B cell acute lymphocytic leukemia associated with t(1;19) translocation. Alternatively spliced transcript variants encoding different isoforms (some with different subcellular localization, PMID:15004329) have been described for this gene. [provided by RefSeq, Aug 2011]
Target gene [ANKS1B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004298 chr12 72 31 17 120 View
6005143 chr12 66 11 18 95 View
6010751 chr12 0 29 0 29 View
6023270 chr12 3 1 0 4 View
6027469 chr12 2 0 0 2 View
6029969 chr12 1 0 0 1 View
6032065 chr12 0 0 0 0 View

Target gene [ANKS1B] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ANKS1B peak across samples

Peak Plot