HTLV1 Target gene Detail Information

> APOL6 Gene Search Result


Gene Information
Gene Name APOL6
Gene ID 80830
Gene Full Name apolipoprotein L6
Gene Alias APOL-VI|APOLVI
Transcripts ENSG00000221963
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nuclear bodies;Cytosol;
Membrane Info Predicted membrane proteins
Uniport_ID Q9BWW8
HGNC ID HGNC:14870
OMIM ID 607256
Summary This gene is a member of the apolipoprotein L gene family. The encoded protein is found in the cytoplasm, where it may affect the movement of lipids or allow the binding of lipids to organelles. [provided by RefSeq, Jul 2008]
Target gene [APOL6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000768 chr22 861 9 2 872 View
6005877 chr22 29 41 9 79 View
6013375 chr22 15 1 3 19 View

Target gene [APOL6] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - APOL6 peak across samples

Peak Plot