HTLV1 Target gene Detail Information

> ARHGAP6 Gene Search Result


Gene Information
Gene Name ARHGAP6
Gene ID 395
Gene Full Name Rho GTPase activating protein 6
Gene Alias RHOGAP6|RHOGAPX-1
Transcripts ENSG00000047648
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Mitotic spindle;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID O43182
HGNC ID HGNC:676
OMIM ID 300118
Summary This gene encodes a member of the rhoGAP family of proteins which play a role in the regulation of actin polymerization at the plasma membrane during several cellular processes. This protein is thought to have two independent functions, one as a GTPase-activating protein with specificity for RhoA, and another as a cytoskeletal protein that promotes actin remodeling. Multiple alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jul 2008]
Target gene [ARHGAP6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002573 chrX 8 55 165 228 View
6003333 chrX 78 89 0 167 View
6017311 chrX 0 7 4 11 View
6027242 chrX 1 1 0 2 View

Target gene [ARHGAP6] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ARHGAP6 peak across samples

Peak Plot