HBV Target gene Detail Information

> ARHGEF10L Gene Search Result


Gene Information
Gene Name ARHGEF10L
Gene ID 55160
Gene Full Name Rho guanine nucleotide exchange factor 10 like
Gene Alias GrinchGEF
Transcripts ENSG00000074964
Virus HBV
Gene Type protein-coding
HPA Location Info Golgi apparatus, Vesicles, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9HCE6
HGNC ID HGNC:25540
OMIM ID 612494
Summary This gene belongs to the RhoGEF subfamily of RhoGTPases. Members of this subfamily are activated by specific guanine nucleotide exchange factors (GEFs) and are involved in signal transduction. The encoded protein shows cytosolic distribution. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2016]
Target gene [ARHGEF10L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004752 chr1 63 1 6 70 View
1007704 chr1 24 1 0 25 View
1040940 chr1 1 6 6 13 View

Target gene [ARHGEF10L] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ARHGEF10L peak across samples

Peak Plot

> Dataset: GSE68402 - ARHGEF10L peak across samples

Peak Plot

> Dataset: GSE270130 - ARHGEF10L peak across samples

Peak Plot

> Dataset: GSE131257 - ARHGEF10L peak across samples

Peak Plot