HTLV1 Target gene Detail Information

> ARHGEF10L Gene Search Result


Gene Information
Gene Name ARHGEF10L
Gene ID 55160
Gene Full Name Rho guanine nucleotide exchange factor 10 like
Gene Alias GrinchGEF
Transcripts ENSG00000074964
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus, Vesicles, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9HCE6
HGNC ID HGNC:25540
OMIM ID 612494
Summary This gene belongs to the RhoGEF subfamily of RhoGTPases. Members of this subfamily are activated by specific guanine nucleotide exchange factors (GEFs) and are involved in signal transduction. The encoded protein shows cytosolic distribution. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2016]
Target gene [ARHGEF10L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009933 chr1 17 13 4 34 View
6017948 chr1 6 4 0 10 View

Target gene [ARHGEF10L] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ARHGEF10L peak across samples

Peak Plot