HTLV1 Target gene Detail Information

> ARHGEF26 Gene Search Result


Gene Information
Gene Name ARHGEF26
Gene ID 26084
Gene Full Name Rho guanine nucleotide exchange factor 26
Gene Alias CSGEF|HMFN1864|SGEF
Transcripts ENSG00000114790
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96DR7
HGNC ID HGNC:24490
OMIM ID 617552
Summary This gene encodes a member of the Rho-guanine nucleotide exchange factor (Rho-GEF) family. These proteins regulate Rho GTPases by catalyzing the exchange of GDP for GTP. The encoded protein specifically activates RhoG and plays a role in the promotion of macropinocytosis. Underexpression of the encoded protein may be a predictive marker of chemoresistant disease. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Oct 2011]
Target gene [ARHGEF26] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003158 chr3 13 139 27 179 View
6004304 chr3 31 24 65 120 View
6016356 chr3 8 3 1 12 View
6017693 chr3 5 4 1 10 View
6029291 chr3 1 0 0 1 View
6031950 chr3 0 0 0 0 View

Target gene [ARHGEF26] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ARHGEF26 peak across samples

Peak Plot