HTLV1 Target gene Detail Information

> ARID5B Gene Search Result


Gene Information
Gene Name ARID5B
Gene ID 84159
Gene Full Name AT-rich interaction domain 5B
Gene Alias DESRT|MRF-2|MRF2
Transcripts ENSG00000150347
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;Nucleoplasm, Plasma membrane, Cytosol;
Membrane Info Cancer-related genes, Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q14865
HGNC ID HGNC:17362
OMIM ID 608538
Summary This gene encodes a member of the AT-rich interaction domain (ARID) family of DNA binding proteins. The encoded protein forms a histone H3K9Me2 demethylase complex with PHD finger protein 2 and regulates the transcription of target genes involved in adipogenesis and liver development. This gene also plays a role in cell growth and differentiation of B-lymphocyte progenitors, and single nucleotide polymorphisms in this gene are associated with acute lymphoblastic leukemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Sep 2011]
Target gene [ARID5B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000433 chr10 269 533 822 1624 View
6004254 chr10 108 12 2 122 View

Target gene [ARID5B] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ARID5B peak across samples

Peak Plot