HTLV1 Target gene Detail Information

> ASIC2 Gene Search Result


Gene Information
Gene Name ASIC2
Gene ID 40
Gene Full Name acid sensing ion channel subunit 2
Gene Alias ACCN|ACCN1|ASIC2a|BNC1|BNaC1|MDEG|hBNaC1
Transcripts ENSG00000108684
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q16515
HGNC ID HGNC:99
OMIM ID 601784
Summary This gene encodes a member of the degenerin/epithelial sodium channel (DEG/ENaC) superfamily. The members of this family are amiloride-sensitive sodium channels that contain intracellular N and C termini, 2 hydrophobic transmembrane regions, and a large extracellular loop, which has many cysteine residues with conserved spacing. The member encoded by this gene may play a role in neurotransmission. In addition, a heteromeric association between this member and acid-sensing (proton-gated) ion channel 3 has been observed to co-assemble into proton-gated channels sensitive to gadolinium. Alternative splicing has been observed at this locus and two variants, encoding distinct isoforms, have been identified. [provided by RefSeq, Feb 2012]
Target gene [ASIC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001980 chr17 20 182 104 306 View
6002865 chr17 30 96 77 203 View
6003520 chr17 16 132 7 155 View
6013068 chr17 17 3 0 20 View
6015200 chr17 4 1 10 15 View
6015289 chr17 2 4 8 14 View
6017969 chr17 5 1 4 10 View
6020099 chr17 2 4 1 7 View
6020189 chr17 5 1 1 7 View
6020549 chr17 4 0 2 6 View
6020558 chr17 4 0 2 6 View
6021040 chr17 5 1 0 6 View
6021982 chr17 5 0 0 5 View
6022574 chr17 4 1 0 5 View
6023339 chr17 3 1 0 4 View
6023702 chr17 2 2 0 4 View
6026463 chr17 1 1 0 2 View
6029224 chr17 1 0 0 1 View
6029832 chr17 1 0 0 1 View
6029833 chr17 0 1 0 1 View

Target gene [ASIC2] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ASIC2 peak across samples

Peak Plot