HTLV1 Target gene Detail Information

> ASTN2 Gene Search Result


Gene Information
Gene Name ASTN2
Gene ID 23245
Gene Full Name astrotactin 2
Gene Alias bA67K19.1
Transcripts ENSG00000148219
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O75129
HGNC ID HGNC:17021
OMIM ID 612856
Summary This gene encodes a protein that is expressed in the brain and may function in neuronal migration, based on functional studies of the related astrotactin 1 gene in human and mouse. A deletion at this locus has been associated with schizophrenia. Multiple transcript variants encoding different proteins have been found for this locus. [provided by RefSeq, May 2010]
Target gene [ASTN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015710 chr9 3 5 5 13 View
6019771 chr9 5 1 1 7 View
6025772 chr9 0 1 2 3 View
6025784 chr9 1 2 0 3 View
6027345 chr9 2 0 0 2 View
6028384 chr9 1 0 0 1 View
6028407 chr9 0 1 0 1 View

Target gene [ASTN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ASTN2 peak across samples

Peak Plot