HTLV1 Target gene Detail Information

> ATRAID Gene Search Result


Gene Information
Gene Name ATRAID
Gene ID 51374
Gene Full Name all-trans retinoic acid induced differentiation factor
Gene Alias APR--3|APR-3|APR3|C2orf28|HSPC013|PRO240|p18
Transcripts ENSG00000138085
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6UW56
HGNC ID HGNC:24090
OMIM ID 619682
Summary This gene is thought to be involved in apoptosis, and may also be involved in hematopoietic development and differentiation. The use of alternative splice sites and promotors result in multiple transcript variants encoding different isoforms.[provided by RefSeq, Dec 2009]
Target gene [ATRAID] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007373 chr2 54 2 0 56 View

Target gene [ATRAID] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ATRAID peak across samples

Peak Plot