Gene Information
|
Gene Name
|
BBS9 |
|
Gene ID
|
27241
|
|
Gene Full Name
|
Bardet-Biedl syndrome 9 |
|
Gene Alias
|
B1|C18|D1|PTHB1 |
|
Transcripts
|
ENSG00000122507
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Primary cilium, Flagellar centriole, Mid piece, Principal piece;Nucleoplasm, Basal body, Cytosol, Acrosome, Equatorial segment; 
|
|
Membrane Info
|
Disease related genes, Human disease related genes, Predicted intracellular proteins |
|
Uniport_ID
|
Q3SYG4
|
|
HGNC ID
|
HGNC:30000
|
|
OMIM ID
|
607968 |
|
Summary
|
This gene is downregulated by parathyroid hormone in osteoblastic cells, and therefore is thought to be involved in parathyroid hormone action in bones. The exact function of this gene has not yet been determined. Alternatively spliced transcript variants encoding different isoforms have been identified. [provided by RefSeq, Jan 2017] |
Target gene [BBS9] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6006437 |
chr7 |
32 |
23 |
13 |
68 |
View |
| 6019643 |
chr7 |
4 |
3 |
0 |
7 |
View |
| 6028828 |
chr7 |
1 |
0 |
0 |
1 |
View |
Target gene [BBS9] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE224047
|
RNA-seq |
10 |
Illumina NextSeq 500 (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - BBS9 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
