Gene Information
|
Gene Name
|
BCL2L2-PABPN1 |
|
Gene ID
|
100529063
|
|
Gene Full Name
|
BCL2L2-PABPN1 readthrough |
|
Gene Alias
|
- |
|
Transcripts
|
ENSG00000258643
|
|
Virus
|
HPV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoplasm;Nuclear speckles; 
|
|
Membrane Info
|
Cancer-related genes, Predicted intracellular proteins, Transporters |
|
Uniport_ID
|
Q92843
|
|
HGNC ID
|
HGNC:42959
|
|
Summary
|
This locus represents naturally occurring read-through transcription between the neighboring BCL2L2 (BCL2-like 2) and PABPN1 (poly(A) binding protein, nuclear 1) genes on chromosome 14. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Dec 2010] |
Target gene [BCL2L2-PABPN1] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5010601 |
chr14 |
7 |
1 |
0 |
8 |
View |
| 5012760 |
chr14 |
1 |
1 |
0 |
2 |
View |
Target gene [BCL2L2-PABPN1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE183048
|
Chip-seq |
24 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE169622
|
Methylation profiling (Array) |
9 |
Infinium MethylationEPIC |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE165883
|
RNA-seq |
20 |
Illumina NextSeq 500 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - BCL2L2-PABPN1 expression across samples
|
Volcano Plot
|
Bar Plot
|
|
|
HPV Target gene Detail Information
