HTLV1 Target gene Detail Information

> BNC2 Gene Search Result


Gene Information
Gene Name BNC2
Gene ID 54796
Gene Full Name basonuclin zinc finger protein 2
Gene Alias BSN2|LUTO|bn2
Transcripts ENSG00000173068
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli fibrillar center;Nuclear bodies;
Membrane Info Disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q6ZN30
HGNC ID HGNC:30988
OMIM ID 608669
Summary This gene encodes a conserved zinc finger protein. The encoded protein functions in skin color saturation. Mutations in this gene are associated with facial pigmented spots. This gene is also associated with susceptibility to adolescent idiopathic scoliosis. [provided by RefSeq, Jul 2016]
Target gene [BNC2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003547 chr9 75 42 37 154 View
6017911 chr9 9 1 0 10 View
6021282 chr9 0 1 5 6 View
6021283 chr9 0 1 5 6 View
6027929 chr9 1 0 0 1 View
6031522 chr9 0 0 0 0 View
6032269 chr9 0 0 0 0 View

Target gene [BNC2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - BNC2 peak across samples

Peak Plot