HTLV1 Target gene Detail Information

> BRINP1 Gene Search Result


Gene Information
Gene Name BRINP1
Gene ID 1620
Gene Full Name BMP/retinoic acid inducible neural specific 1
Gene Alias DBC1|DBCCR1|FAM5A
Transcripts ENSG00000078725
Virus HTLV1
Gene Type protein-coding
HPA Location Info Microtubules;Intracellular and membrane;
Membrane Info Predicted intracellular proteins, Transporters
Uniport_ID O60477
HGNC ID HGNC:2687
OMIM ID 602865
Summary This gene is located within a chromosomal region that shows loss of heterozygosity in some bladder cancers. It contains a 5' CpG island that may be a frequent target of hypermethylation, and it may undergo hypermethylation-based silencing in some bladder cancers. [provided by RefSeq, Jul 2008]
Target gene [BRINP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007634 chr9 23 15 15 53 View
6020913 chr9 4 1 1 6 View
6023130 chr9 0 4 0 4 View
6031311 chr9 0 0 0 0 View
6031525 chr9 0 0 0 0 View

Target gene [BRINP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - BRINP1 peak across samples

Peak Plot