HTLV1 Target gene Detail Information

> BRWD1 Gene Search Result


Gene Information
Gene Name BRWD1
Gene ID 54014
Gene Full Name bromodomain and WD repeat domain containing 1
Gene Alias C21orf107|CILD51|DCAF19|N143|WDR9|WRD9
Transcripts ENSG00000185658
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli, Cytosol;Nucleoplasm;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9NSI6
HGNC ID HGNC:12760
OMIM ID 617824
Summary This gene encodes a member of the WD repeat protein family. WD repeats are minimally conserved regions of approximately 40 amino acids typically bracketed by gly-his and trp-asp (GH-WD) residues which may facilitate formation of heterotrimeric or multiprotein complexes. Members of this family are involved in a variety of cellular processes including cell cycle progression, signal transduction, apoptosis, and gene regulation. This protein contains 2 bromodomains and multiple WD repeats. This gene is located within the Down syndrome region-2 on chromosome 21. Alternative splicing of this gene generates multiple transcript variants encoding distinct isoforms. In mouse, this gene encodes a nuclear protein that has a polyglutamine-containing region that functions as a transcriptional activation domain which may regulate chromatin remodelling and associates with a component of the SWI/SNF chromatin remodelling complex.[provided by RefSeq, Jun 2011]
Target gene [BRWD1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011859 chr21 23 2 0 25 View
6015257 chr21 11 3 0 14 View
6025253 chr21 1 2 0 3 View
6029972 chr21 1 0 0 1 View

Target gene [BRWD1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - BRWD1 peak across samples

Peak Plot