HTLV1 Target gene Detail Information

> C12orf42 Gene Search Result


Gene Information
Gene Name C12orf42
Gene ID 374470
Gene Full Name chromosome 12 open reading frame 42
Gene Alias -
Transcripts ENSG00000179088
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID Q96LP6
HGNC ID HGNC:24729
Target gene [C12orf42] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005504 chr12 18 68 0 86 View
6007087 chr12 16 43 1 60 View
6009556 chr12 36 0 0 36 View
6011857 chr12 10 15 0 25 View
6015886 chr12 0 0 13 13 View
6026565 chr12 2 0 0 2 View
6027484 chr12 1 1 0 2 View
6032559 chr12 0 0 0 0 View

Target gene [C12orf42] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - C12orf42 peak across samples

Peak Plot