HTLV1 Target gene Detail Information

> C8orf44-SGK3 Gene Search Result


Gene Information
Gene Name C8orf44-SGK3
Gene ID 100533105
Gene Full Name C8orf44-SGK3 readthrough
Gene Alias -
Transcripts ENSG00000288602
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;Nucleoplasm;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:48354
Summary This locus represents naturally occurring read-through transcription between the neighboring putative uncharacterized protein C8orf44 (GeneID 56260) and serine/threonine-protein kinase Sgk3 (GeneID 23678) genes on chromosome 8. The read-through transcript produces a protein that shares sequence identity with the downstream gene product. [provided by RefSeq, Feb 2011]
Target gene [C8orf44-SGK3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6024190 chr8 3 0 0 3 View
6024389 chr8 3 0 0 3 View

Target gene [C8orf44-SGK3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - C8orf44-SGK3 peak across samples

Peak Plot