HTLV1 Target gene Detail Information

> CACNA2D3 Gene Search Result


Gene Information
Gene Name CACNA2D3
Gene ID 55799
Gene Full Name calcium voltage-gated channel auxiliary subunit alpha2delta 3
Gene Alias HSA272268
Transcripts ENSG00000157445
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Principal piece;
Membrane Info FDA approved drug targets, Predicted intracellular proteins, Predicted membrane proteins, Transporters
Uniport_ID Q8IZS8
HGNC ID HGNC:15460
OMIM ID 606399
Summary This gene encodes a member of the alpha-2/delta subunit family, a protein in the voltage-dependent calcium channel complex. Calcium channels mediate the influx of calcium ions into the cell upon membrane polarization and consist of a complex of alpha-1, alpha-2/delta, beta, and gamma subunits in a 1:1:1:1 ratio. Various versions of each of these subunits exist, either expressed from similar genes or the result of alternative splicing. Research on a highly similar protein in rabbit suggests the protein described in this record is cleaved into alpha-2 and delta subunits. Alternate transcriptional splice variants of this gene have been observed but have not been thoroughly characterized. [provided by RefSeq, Jul 2008]
Target gene [CACNA2D3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006765 chr3 56 5 2 63 View
6008911 chr3 16 23 2 41 View
6010814 chr3 15 11 3 29 View
6012174 chr3 0 1 22 23 View
6012266 chr3 7 9 7 23 View
6017883 chr3 10 0 0 10 View
6019103 chr3 3 3 2 8 View
6020899 chr3 2 2 2 6 View
6021042 chr3 4 2 0 6 View
6021534 chr3 5 1 0 6 View
6022127 chr3 4 1 0 5 View
6023283 chr3 4 0 0 4 View
6023617 chr3 4 0 0 4 View
6023839 chr3 2 2 0 4 View
6029298 chr3 1 0 0 1 View
6033081 chr3 0 0 0 0 View

Target gene [CACNA2D3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CACNA2D3 peak across samples

Peak Plot