HTLV1 Target gene Detail Information

> CAPN2 Gene Search Result


Gene Information
Gene Name CAPN2
Gene ID 824
Gene Full Name calpain 2
Gene Alias CANP2|CANPL2|CANPml|mCANP
Transcripts ENSG00000162909
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol, Connecting piece, Mid piece;Principal piece;
Membrane Info Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P17655
HGNC ID HGNC:1479
OMIM ID 114230
Summary The calpains, calcium-activated neutral proteases, are nonlysosomal, intracellular cysteine proteases. The mammalian calpains include ubiquitous, stomach-specific, and muscle-specific proteins. The ubiquitous enzymes consist of heterodimers with distinct large, catalytic subunits associated with a common small, regulatory subunit. This gene encodes the large subunit of the ubiquitous enzyme, calpain 2. Multiple heterogeneous transcriptional start sites in the 5' UTR have been reported. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Mar 2009]
Target gene [CAPN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003015 chr1 34 98 58 190 View
6008329 chr1 22 4 20 46 View
6008785 chr1 23 4 15 42 View
6008795 chr1 23 4 15 42 View
6008796 chr1 23 4 15 42 View

Target gene [CAPN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CAPN2 peak across samples

Peak Plot