HTLV1 Target gene Detail Information

> CAPRIN2 Gene Search Result


Gene Information
Gene Name CAPRIN2
Gene ID 65981
Gene Full Name caprin family member 2
Gene Alias C1QDC1|EEG-1|EEG1|RNG140
Transcripts ENSG00000110888
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoplasm, Centrosome;
Membrane Info Predicted intracellular proteins
Uniport_ID Q6IMN6
HGNC ID HGNC:21259
OMIM ID 610375
Summary The protein encoded by this gene may regulate the transport of mRNA. It may play a role in the differentiation of erythroblasts. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2016]
Target gene [CAPRIN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6014233 chr12 16 1 0 17 View
6022882 chr12 1 1 2 4 View

Target gene [CAPRIN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CAPRIN2 peak across samples

Peak Plot