HTLV1 Target gene Detail Information

> CARNMT1 Gene Search Result


Gene Information
Gene Name CARNMT1
Gene ID 138199
Gene Full Name carnosine N-methyltransferase 1
Gene Alias C9orf41|UPF0586
Transcripts ENSG00000156017
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q8N4J0
HGNC ID HGNC:23435
OMIM ID 616552
Summary The protein encoded by this gene is a methyltransferase that converts carnosine to anserine, a dipeptide found abundantly in skeletal muscle. The encoded protein can methylate other dipeptides as well. Three transcript variants encoding two different isoforms have been found for this gene. [provided by RefSeq, Feb 2016]
Target gene [CARNMT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003275 chr9 140 12 17 169 View

Target gene [CARNMT1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CARNMT1 peak across samples

Peak Plot