Gene Information
|
Gene Name
|
CCBE1 |
|
Gene ID
|
147372
|
|
Gene Full Name
|
collagen and calcium binding EGF domains 1 |
|
Gene Alias
|
HKLLS1 |
|
Transcripts
|
ENSG00000183287
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Plasma membrane, Cytosol;Secreted to extracellular matrix; 
|
|
Membrane Info
|
Disease related genes, Human disease related genes, Plasma proteins, Predicted secreted proteins |
|
Uniport_ID
|
Q6UXH8
|
|
HGNC ID
|
HGNC:29426
|
|
OMIM ID
|
612753 |
|
Summary
|
This gene is thought to function in extracellular matrix remodeling and migration. It is predominantly expressed in the ovary, but down regulated in ovarian cancer cell lines and primary carcinomas, suggesting its role as a tumour suppressor. Mutations in this gene have been associated with Hennekam lymphangiectasia-lymphedema syndrome, a generalized lymphatic dysplasia in humans. [provided by RefSeq, Mar 2010] |
Target gene [CCBE1] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6013902 |
chr18 |
14 |
3 |
1 |
18 |
View |
| 6013903 |
chr18 |
14 |
3 |
1 |
18 |
View |
| 6013904 |
chr18 |
14 |
3 |
1 |
18 |
View |
| 6019331 |
chr18 |
6 |
2 |
0 |
8 |
View |
Target gene [CCBE1] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - CCBE1 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
