HTLV1 Target gene Detail Information

> CCDC169-SOHLH2 Gene Search Result


Gene Information
Gene Name CCDC169-SOHLH2
Gene ID 100526761
Gene Full Name CCDC169-SOHLH2 readthrough
Gene Alias C13orf38-SOHLH2|SOHLH2|TEB1
Transcripts ENSG00000250709
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:38866
Summary This locus represents naturally occurring read-through transcription between the neighboring C13orf38 (chromosome 13 open reading frame 38) and SOHLH2 (spermatogenesis and oogenesis specific basic helix-loop-helix 2) genes. The read-through transcript encodes a fusion protein that shares sequence identity with the products of each individual gene. [provided by RefSeq, Nov 2010]
Target gene [CCDC169-SOHLH2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6026768 chr13 2 0 0 2 View

Target gene [CCDC169-SOHLH2] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CCDC169-SOHLH2 peak across samples

Peak Plot