HTLV1 Target gene Detail Information

> CCDC171 Gene Search Result


Gene Information
Gene Name CCDC171
Gene ID 203238
Gene Full Name coiled-coil domain containing 171
Gene Alias C9orf93|bA536D16.1|bA778P13.1
Transcripts ENSG00000164989
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID Q6TFL3
HGNC ID HGNC:29828
Target gene [CCDC171] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001121 chr9 346 132 99 577 View
6004265 chr9 4 12 106 122 View
6011114 chr9 27 1 0 28 View
6025650 chr9 3 0 0 3 View
6026548 chr9 2 0 0 2 View

Target gene [CCDC171] related to Omics data
Data ID Experiment type Sample number Platform
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CCDC171 peak across samples

Peak Plot