HPV Target gene Detail Information

> CCDC188 Gene Search Result


Gene Information
Gene Name CCDC188
Gene ID 388849
Gene Full Name coiled-coil domain containing 188
Gene Alias -
Transcripts ENSG00000234409
Virus HPV
Gene Type protein-coding
HPA Location Info Nuclear bodies;Nucleoplasm, Flagellar centriole;
Membrane Info Predicted membrane proteins
Uniport_ID H7C350
HGNC ID HGNC:51899
Summary Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CCDC188] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011307 chr22 29 36 0 65 View

Target gene [CCDC188] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
E
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - CCDC188 expression across samples

Volcano Plot

Bar Plot