HPV Target gene Detail Information

> CCDC190 Gene Search Result


Gene Information
Gene Name CCDC190
Gene ID 339512
Gene Full Name coiled-coil domain containing 190
Gene Alias C1orf110
Transcripts ENSG00000185860
Virus HPV
Gene Type protein-coding
HPA Location Info Actin filaments, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q86UF4
HGNC ID HGNC:28736
Target gene [CCDC190] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006711 chr1 14 2 0 16 View
5008118 chr1 5 2 0 7 View

Target gene [CCDC190] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE65858 Expression array 270 Illumina HumanHT-12 V4.0 expression beadchip
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CCDC190 peak across samples

Peak Plot

> Dataset: GSE143026 - CCDC190 peak across samples

Peak Plot