HTLV1 Target gene Detail Information

> CCDC7 Gene Search Result


Gene Information
Gene Name CCDC7
Gene ID 79741
Gene Full Name coiled-coil domain containing 7
Gene Alias BIOT2|BioT2-A|BioT2-B|BioT2-C|C10orf68
Transcripts ENSG00000216937
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli;Mitotic spindle, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96M83
HGNC ID HGNC:26533
OMIM ID 619444
Target gene [CCDC7] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003179 chr10 137 32 8 177 View
6003216 chr10 131 41 3 175 View
6007132 chr10 55 4 0 59 View
6007389 chr10 53 3 0 56 View
6015226 chr10 13 1 0 14 View
6020154 chr10 0 7 0 7 View
6020155 chr10 0 7 0 7 View
6020156 chr10 0 7 0 7 View
6020157 chr10 0 7 0 7 View
6020158 chr10 0 7 0 7 View

Target gene [CCDC7] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CCDC7 peak across samples

Peak Plot