HTLV1 Target gene Detail Information

> CCDC85C Gene Search Result


Gene Information
Gene Name CCDC85C
Gene ID 317762
Gene Full Name coiled-coil domain containing 85C
Gene Alias -
Transcripts ENSG00000205476
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear speckles, Cell Junctions;
Membrane Info Predicted intracellular proteins
Uniport_ID A6NKD9
HGNC ID HGNC:35459
Summary Predicted to be involved in cerebral cortex development. Predicted to act upstream of or within several processes, including Notch signaling pathway; establishment of cell polarity; and radial glial cell differentiation. Located in adherens junction. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CCDC85C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001037 chr14 247 319 66 632 View
6005378 chr14 83 5 1 89 View

Target gene [CCDC85C] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CCDC85C peak across samples

Peak Plot