HBV Target gene Detail Information

> CHAMP1 Gene Search Result


Gene Information
Gene Name CHAMP1
Gene ID 283489
Gene Full Name chromosome alignment maintaining phosphoprotein 1
Gene Alias C13orf8|CAMP|CHAMP|MRD40|NEDHILD|ZNF828
Transcripts ENSG00000198824
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear bodies;
Membrane Info Human disease related genes, Predicted intracellular proteins
Uniport_ID Q96JM3
HGNC ID HGNC:20311
OMIM ID 616327
Summary This gene encodes a zinc finger protein that functions as a regulator of chromosome segregation in mitosis. The encoded protein is required for correct alignment of chromosomes on the metaphase plate, and plays a role in maintaining the attachment of sister kinetochores to microtubules from opposite spindle poles. Mutations in this gene are associated with an autosomal dominant form of intellectual disability. [provided by RefSeq, Jul 2017]
Target gene [CHAMP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005747 chr13 46 2 0 48 View
1021875 chr13 46 2 0 48 View
1042067 chr13 47 6 0 53 View

Target gene [CHAMP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - CHAMP1 peak across samples

Peak Plot

> Dataset: GSE68402 - CHAMP1 peak across samples

Peak Plot

> Dataset: GSE270130 - CHAMP1 peak across samples

Peak Plot

> Dataset: GSE131257 - CHAMP1 peak across samples

Peak Plot