HTLV1 Target gene Detail Information

> CHD9 Gene Search Result


Gene Information
Gene Name CHD9
Gene ID 80205
Gene Full Name chromodomain helicase DNA binding protein 9
Gene Alias AD013|CHD-9|CReMM|KISH2|PRIC320
Transcripts ENSG00000177200
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Cytosol;
Membrane Info Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q3L8U1
HGNC ID HGNC:25701
OMIM ID 616936
Summary Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and ATP-dependent activity, acting on DNA. Predicted to be involved in DNA duplex unwinding; chromatin looping; and chromatin remodeling. Located in cytosol and nucleoplasm. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CHD9] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006717 chr16 62 2 0 64 View
6009708 chr16 16 16 3 35 View
6017796 chr16 7 3 0 10 View
6023433 chr16 4 0 0 4 View

Target gene [CHD9] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CHD9 peak across samples

Peak Plot