HTLV1 Target gene Detail Information

> CKAP2 Gene Search Result


Gene Information
Gene Name CKAP2
Gene ID 26586
Gene Full Name cytoskeleton associated protein 2
Gene Alias LB1|TMAP|se20-10
Transcripts ENSG00000136108
Virus HTLV1
Gene Type protein-coding
HPA Location Info Microtubules, Primary cilium, Basal body;Mitotic spindle, Centrosome;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8WWK9
HGNC ID HGNC:1990
OMIM ID 611569
Summary This gene encodes a cytoskeleton-associated protein that stabalizes microtubules and plays a role in the regulation of cell division. The encoded protein is itself regulated through phosphorylation at multiple serine and threonine residues. There is a pseudogene of this gene on chromosome 14. Alternative splicing results in multiple transcript variations. [provided by RefSeq, Nov 2013]
Target gene [CKAP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008571 chr13 36 7 1 44 View

Target gene [CKAP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CKAP2 peak across samples

Peak Plot