HBV Target gene Detail Information

> CLPTM1L Gene Search Result


Gene Information
Gene Name CLPTM1L
Gene ID 81037
Gene Full Name CLPTM1 like
Gene Alias CRR9
Transcripts ENSG00000049656
Virus HBV
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins, Transporters
Uniport_ID Q96KA5
HGNC ID HGNC:24308
OMIM ID 612585
Summary The protein encoded by this gene is a membrane protein whose overexpression in cisplatin-sensitive cells causes apoptosis. Polymorphisms in this gene have been reported to increase susceptibility to several cancers, including lung, pancreatic, and breast cancers. [provided by RefSeq, Nov 2015]
Target gene [CLPTM1L] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000330 chr5 890 1725 196 2811 View
1000332 chr5 888 1722 200 2810 View
1000628 chr5 540 1018 184 1742 View
1001128 chr5 296 664 66 1026 View
1003280 chr5 48 100 1 149 View
1006614 chr5 27 9 0 36 View
1023022 chr5 888 1722 200 2810 View
1023023 chr5 540 1018 184 1742 View
1023478 chr5 21 25 14 60 View
1023704 chr5 89 3 0 92 View
1043022 chr5 1154 2205 280 3639 View

Target gene [CLPTM1L] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
S
  GSE247322 		scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE247322 - Gene expression in cell subsets