HTLV1 Target gene Detail Information

> CLSTN2 Gene Search Result


Gene Information
Gene Name CLSTN2
Gene ID 64084
Gene Full Name calsyntenin 2
Gene Alias ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma
Transcripts ENSG00000158258
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;Cytokinetic bridge;
Membrane Info Predicted membrane proteins
Uniport_ID Q9H4D0
HGNC ID HGNC:17448
OMIM ID 611323
Summary Predicted to enable calcium ion binding activity. Predicted to be involved in positive regulation of synapse assembly and positive regulation of synaptic transmission. Predicted to be located in several cellular components, including Golgi membrane; endoplasmic reticulum membrane; and postsynaptic density. Predicted to be active in cell surface; glutamatergic synapse; and postsynaptic density membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CLSTN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009649 chr3 7 23 5 35 View
6013118 chr3 9 11 0 20 View
6019417 chr3 8 0 0 8 View
6022635 chr3 3 1 1 5 View
6023830 chr3 4 0 0 4 View
6023831 chr3 4 0 0 4 View
6026310 chr3 2 0 0 2 View
6029025 chr3 0 1 0 1 View
6030008 chr3 1 0 0 1 View

Target gene [CLSTN2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CLSTN2 peak across samples

Peak Plot