HTLV1 Target gene Detail Information

> CNTN5 Gene Search Result


Gene Information
Gene Name CNTN5
Gene ID 53942
Gene Full Name contactin 5
Gene Alias HNB-2s|NB-2
Transcripts ENSG00000149972
Virus HTLV1
Gene Type protein-coding
HPA Location Info Intracellular and membrane;
Membrane Info Plasma proteins, Predicted intracellular proteins
Uniport_ID O94779
HGNC ID HGNC:2175
OMIM ID 607219
Summary The protein encoded by this gene is a member of the immunoglobulin superfamily, and contactin family, which mediate cell surface interactions during nervous system development. This protein is a glycosylphosphatidylinositol (GPI)-anchored neuronal membrane protein that functions as a cell adhesion molecule. It may play a role in the formation of axon connections in the developing nervous system. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]
Target gene [CNTN5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006660 chr11 0 65 0 65 View
6009989 chr11 9 7 17 33 View
6009990 chr11 9 7 17 33 View
6010400 chr11 8 13 10 31 View
6011850 chr11 13 3 9 25 View
6020241 chr11 0 2 5 7 View
6024734 chr11 3 0 0 3 View
6024965 chr11 3 0 0 3 View
6025461 chr11 3 0 0 3 View
6025752 chr11 3 0 0 3 View
6027831 chr11 0 1 0 1 View
6031261 chr11 0 0 0 0 View

Target gene [CNTN5] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CNTN5 peak across samples

Peak Plot