HTLV1 Target gene Detail Information

> COG3 Gene Search Result


Gene Information
Gene Name COG3
Gene ID 83548
Gene Full Name component of oligomeric golgi complex 3
Gene Alias CDG2BB|SEC34
Transcripts ENSG00000136152
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus, Plasma membrane;Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96JB2
HGNC ID HGNC:18619
OMIM ID 606975
Summary This gene encodes a component of the conserved oligomeric Golgi (COG) complex which is composed of eight different subunits and is required for normal Golgi morphology and localization. Defects in the COG complex result in multiple deficiencies in protein glycosylation. The protein encoded by this gene is involved in ER-Golgi transport.[provided by RefSeq, Jun 2011]
Target gene [COG3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6018091 chr13 3 6 0 9 View
6018108 chr13 3 6 0 9 View
6020255 chr13 6 1 0 7 View

Target gene [COG3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - COG3 peak across samples

Peak Plot