HTLV1 Target gene Detail Information

> CPNE4 Gene Search Result


Gene Information
Gene Name CPNE4
Gene ID 131034
Gene Full Name copine 4
Gene Alias COPN4|CPN4
Transcripts ENSG00000196353
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID Q96A23
HGNC ID HGNC:2317
OMIM ID 604208
Summary This gene belongs to the highly conserved copine family. It encodes a calcium-dependent, phospholipid-binding protein, which may be involved in membrane trafficking, mitogenesis and development. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jan 2014]
Target gene [CPNE4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015388 chr3 3 11 0 14 View
6016413 chr3 9 1 2 12 View
6018546 chr3 8 0 1 9 View
6020932 chr3 6 0 0 6 View
6022279 chr3 1 4 0 5 View
6023247 chr3 0 4 0 4 View
6025976 chr3 1 0 1 2 View
6031285 chr3 0 0 0 0 View
6033452 chr3 0 0 0 0 View

Target gene [CPNE4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CPNE4 peak across samples

Peak Plot