HTLV1 Target gene Detail Information

> CTNNA3 Gene Search Result


Gene Information
Gene Name CTNNA3
Gene ID 29119
Gene Full Name catenin alpha 3
Gene Alias ARVD13|VR22
Transcripts ENSG00000183230
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9UI47
HGNC ID HGNC:2511
OMIM ID 607667
Summary This gene encodes a protein that belongs to the vinculin/alpha-catenin family. The encoded protein plays a role in cell-cell adhesion in muscle cells. Mutations in this gene are associated with arrhythmogenic right ventricular dysplasia, familial 13. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Mar 2014]
Target gene [CTNNA3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011449 chr10 25 1 0 26 View
6013487 chr10 16 0 3 19 View
6019223 chr10 0 8 0 8 View
6019298 chr10 7 1 0 8 View
6020882 chr10 5 1 0 6 View
6022426 chr10 1 4 0 5 View
6022534 chr10 4 1 0 5 View
6024512 chr10 3 0 0 3 View
6024585 chr10 3 0 0 3 View
6025193 chr10 1 2 0 3 View
6025194 chr10 2 1 0 3 View
6025315 chr10 2 1 0 3 View
6025564 chr10 3 0 0 3 View
6025817 chr10 1 2 0 3 View
6026626 chr10 0 2 0 2 View
6027986 chr10 1 0 0 1 View
6028829 chr10 1 0 0 1 View
6029176 chr10 0 1 0 1 View
6032775 chr10 0 0 0 0 View
6033048 chr10 0 0 0 0 View

Target gene [CTNNA3] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CTNNA3 peak across samples

Peak Plot