HBV Target gene Detail Information

> CTNND2 Gene Search Result


Gene Information
Gene Name CTNND2
Gene ID 1501
Gene Full Name catenin delta 2
Gene Alias GT24|NPRAP
Transcripts ENSG00000169862
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cell Junctions;Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9UQB3
HGNC ID HGNC:2516
OMIM ID 604275
Summary This gene encodes an adhesive junction associated protein of the armadillo/beta-catenin superfamily and is implicated in brain and eye development and cancer formation. The protein encoded by this gene promotes the disruption of E-cadherin based adherens junction to favor cell spreading upon stimulation by hepatocyte growth factor. This gene is overexpressed in prostate adenocarcinomas and is associated with decreased expression of tumor suppressor E-cadherin in this tissue. This gene resides in a region of the short arm of chromosome 5 that is deleted in Cri du Chat syndrome. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Dec 2013]
Target gene [CTNND2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006768 chr5 33 1 0 34 View
1007533 chr5 16 8 2 26 View
1007783 chr5 15 7 2 24 View
1009320 chr5 3 13 0 16 View
1009348 chr5 3 13 0 16 View
1009352 chr5 3 13 0 16 View
1009353 chr5 3 13 0 16 View
1009359 chr5 3 13 0 16 View
1009360 chr5 3 13 0 16 View
1009365 chr5 3 13 0 16 View
1009366 chr5 3 13 0 16 View
1009389 chr5 3 13 0 16 View
1009390 chr5 3 13 0 16 View
1009399 chr5 3 13 0 16 View
1011197 chr5 4 6 0 10 View
1012194 chr5 5 0 2 7 View
1013704 chr5 2 2 0 4 View
1013717 chr5 2 2 0 4 View
1014545 chr5 3 0 0 3 View
1019685 chr5 0 0 0 0 View
1023053 chr5 2 2 0 4 View
1041436 chr5 2 1 0 3 View
1041437 chr5 3 0 0 3 View
1043026 chr5 4 2 0 6 View
1043027 chr5 3 0 0 3 View

Target gene [CTNND2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE64877 		Chip-seq 2 Illumina Genome Analyzer (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94660 - CTNND2 expression across samples

Volcano Plot

Bar Plot