HTLV1 Target gene Detail Information

> DEPDC1 Gene Search Result


Gene Information
Gene Name DEPDC1
Gene ID 55635
Gene Full Name DEP domain containing 1
Gene Alias DEP.8|DEPDC1-V2|DEPDC1A|SDP35
Transcripts ENSG00000024526
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nucleoli fibrillar center;
Membrane Info Predicted intracellular proteins
Uniport_ID Q5TB30
HGNC ID HGNC:22949
OMIM ID 612002
Summary Predicted to enable GTPase activator activity. Involved in negative regulation of DNA-templated transcription. Located in nucleus. Part of transcription repressor complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [DEPDC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6013171 chr1 19 1 0 20 View

Target gene [DEPDC1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - DEPDC1 peak across samples

Peak Plot