HTLV1 Target gene Detail Information

> EFCAB6 Gene Search Result


Gene Information
Gene Name EFCAB6
Gene ID 64800
Gene Full Name EF-hand calcium binding domain 6
Gene Alias DJBP|HSCBCIP1|dJ185D5.1
Transcripts ENSG00000186976
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q5THR3
HGNC ID HGNC:24204
OMIM ID 619664
Summary This gene encodes a protein which directly binds the oncogene DJ-1 and androgen receptor to form a ternary complex in cells. This binding protein recruits histone-deacetylase complexes in order to repress transcription activity of androgen receptor. This protein may also play a role in spermatogenesis and fertilization. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2011]
Target gene [EFCAB6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005594 chr22 47 5 32 84 View
6007757 chr22 34 12 6 52 View
6009751 chr22 35 0 0 35 View
6016929 chr22 9 1 1 11 View
6028953 chr22 0 1 0 1 View

Target gene [EFCAB6] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - EFCAB6 peak across samples

Peak Plot