HTLV1 Target gene Detail Information

> ERC1 Gene Search Result


Gene Information
Gene Name ERC1
Gene ID 23085
Gene Full Name ELKS/RAB6-interacting/CAST family member 1
Gene Alias Cast2|ELKS|ERC-1|RAB6IP2
Transcripts ENSG00000082805
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Vesicles, Centrosome;
Membrane Info Cancer-related genes, Disease related genes, Predicted intracellular proteins
Uniport_ID Q8IUD2
HGNC ID HGNC:17072
OMIM ID 607127
Summary The protein encoded by this gene is a member of a family of RIM-binding proteins. RIMs are active zone proteins that regulate neurotransmitter release. This gene has been found fused to the receptor-type tyrosine kinase gene RET by gene rearrangement due to the translocation t(10;12)(q11;p13) in thyroid papillary carcinoma. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014]
Target gene [ERC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002737 chr12 205 3 5 213 View
6010388 chr12 29 1 1 31 View

Target gene [ERC1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ERC1 peak across samples

Peak Plot