HPV Target gene Detail Information

> FAM230C Gene Search Result


Gene Information
Gene Name FAM230C
Gene ID 26080
Gene Full Name family with sequence similarity 230 member C
Gene Alias LINC00281|NCRNA00281
Transcripts ENSG00000279516
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:24482
Target gene [FAM230C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5014930 chr13 1781 1563 412 3756 View
5014931 chr13 10 5 2 17 View

Target gene [FAM230C] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - FAM230C peak across samples

Peak Plot