HBV Target gene Detail Information

> FGGY Gene Search Result


Gene Information
Gene Name FGGY
Gene ID 55277
Gene Full Name FGGY carbohydrate kinase domain containing
Gene Alias -
Transcripts ENSG00000172456
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear bodies;
Membrane Info Disease related genes, Enzymes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q96C11
HGNC ID HGNC:25610
OMIM ID 611370
Summary This gene encodes a protein that phosphorylates carbohydrates such as ribulose, ribitol, and L-arabinitol. Genome-wide association studies in some populations have found an association between polymorphisms in this gene and sporadic amyotrophic lateral sclerosis, but studies of other populations have not been able to replicate this association. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2013]
Target gene [FGGY] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1001312 chr1 570 98 119 787 View
1001499 chr1 491 79 89 659 View
1003452 chr1 130 2 0 132 View
1006077 chr1 9 25 10 44 View
1010835 chr1 4 5 2 11 View
1010862 chr1 4 5 2 11 View
1021709 chr1 570 98 119 787 View
1021710 chr1 491 79 89 659 View
1023067 chr1 130 2 0 132 View
1041684 chr1 657 112 126 895 View
1041685 chr1 634 107 118 859 View
1041686 chr1 0 0 0 0 View

Target gene [FGGY] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - FGGY peak across samples

Peak Plot

> Dataset: GSE68402 - FGGY peak across samples

Peak Plot

> Dataset: GSE270130 - FGGY peak across samples

Peak Plot

> Dataset: GSE131257 - FGGY peak across samples

Peak Plot