HTLV1 Target gene Detail Information

> FOCAD Gene Search Result


Gene Information
Gene Name FOCAD
Gene ID 54914
Gene Full Name focadhesin
Gene Alias KIAA1797|SCOLIV
Transcripts ENSG00000188352
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5VW36
HGNC ID HGNC:23377
OMIM ID 614606
Summary Predicted to be involved in regulation of post-transcriptional gene silencing. Located in focal adhesion. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [FOCAD] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6015625 chr9 12 2 0 14 View
6021210 chr9 4 2 0 6 View
6029766 chr9 1 0 0 1 View
6029930 chr9 0 1 0 1 View
6030661 chr9 0 0 0 0 View

Target gene [FOCAD] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FOCAD peak across samples

Peak Plot