HBV Target gene Detail Information

> FTCD Gene Search Result


Gene Information
Gene Name FTCD
Gene ID 10841
Gene Full Name formimidoyltransferase cyclodeaminase
Gene Alias LCHC1
Transcripts ENSG00000160282
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol;Plasma membrane;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins
Uniport_ID O95954
HGNC ID HGNC:3974
OMIM ID 606806
Summary The protein encoded by this gene is a bifunctional enzyme that channels 1-carbon units from formiminoglutamate, a metabolite of the histidine degradation pathway, to the folate pool. Mutations in this gene are associated with glutamate formiminotransferase deficiency. Alternatively spliced transcript variants have been found for this gene.[provided by RefSeq, Dec 2009]
Target gene [FTCD] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000283 chr21 761 1388 934 3083 View
1002716 chr21 113 102 1 216 View
1009948 chr21 14 0 0 14 View
1011461 chr21 4 5 0 9 View
1012660 chr21 4 2 0 6 View
1039968 chr21 7 7 7 21 View
1039969 chr21 7 7 7 21 View
1039970 chr21 45 6 5 56 View
1039971 chr21 45 6 5 56 View
1039972 chr21 45 6 5 56 View
1039973 chr21 45 6 5 56 View
1039974 chr21 45 6 5 56 View
1039975 chr21 45 6 5 56 View
1039976 chr21 45 6 5 56 View
1039977 chr21 45 6 5 56 View
1039978 chr21 45 6 5 56 View
1039979 chr21 45 5 4 54 View
1039980 chr21 45 5 4 54 View
1039981 chr21 45 5 4 54 View
1039982 chr21 45 5 4 54 View
1039983 chr21 45 5 4 54 View
1039984 chr21 45 5 4 54 View
1039985 chr21 45 5 4 54 View
1039986 chr21 45 5 4 54 View
1039987 chr21 45 5 4 54 View
1039988 chr21 45 5 4 54 View
1039989 chr21 45 5 4 54 View
1039990 chr21 45 5 4 54 View
1039991 chr21 45 5 4 54 View
1039992 chr21 45 5 4 54 View
1039993 chr21 45 5 4 54 View
1039994 chr21 45 5 4 54 View
1039995 chr21 45 5 3 53 View
1039996 chr21 45 5 3 53 View
1039997 chr21 45 5 2 52 View

Target gene [FTCD] related to Omics data
Data ID Experiment type Sample number Platform
S
  GSE252863 		scRNA-seq 10 Illumina HiSeq 2500 (Homo sapiens)
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
S
  GSE199850 		scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - FTCD expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE94660 - FTCD expression across samples

Volcano Plot

Bar Plot